Predicting biotic interactions

Are interactions predictible? Can we build better models? How do we effectively use machine learning for this task? A big part of our research activity is to develop and benchmark models to predict interactions between species.

Guidelines for the Prediction of Species Interactions Through Binary Classification
2023 Text (via DOI)
T. Poisot
Inferring Food Web Structure From Predator–prey Body Size Relationships
2013 Text (via DOI)
D. Gravel T. Poisot C. Albouy L. Velez D. Mouillot
Ecological Interactions and the Netflix Problem
2017 Text (via DOI)
P. Desjardins-Proulx I. Laigle T. Poisot D. Gravel
Inferring Predator–prey Interactions in Food Webs
2019 Text (via DOI)
J.P.F. Pomeranz R.M. Thompson T. Poisot J.S. Harding
Optimal Transportation Theory for Species Interaction Networks
2021 Text (via DOI)
M. Stock T. Poisot B. De Baets
A Roadmap Towards Predicting Species Interaction Networks (Across Space and Time)
2021 Text (via DOI)
T. Strydom M.D. Catchen F. Banville D. Caron G. Dansereau P. Desjardins-Proulx N.R. Forero-Muñoz G. Higino B. Mercier A. Gonzalez D. Gravel L. Pollock T. Poisot
Graph Embedding and Transfer Learning Can Help Predict Potential Species Interaction Networks Despite Data Limitations
2023 Text (via DOI)
T. Strydom S. Bouskila F. Banville C. Barros D. Caron M.J. Farrell M.J. Fortin B. Mercier L.J. Pollock R. Runghen G.V. Dalla Riva T. Poisot