Predicting biotic interactions

Are interactions predictible? Can we build better models? How do we effectively use machine learning for this task? A big part of our research activity is to develop and benchmark models to predict interactions between species.

Guidelines for the Prediction of Species Interactions Through Binary Classification
T. Poisot
Inferring Food Web Structure From Predator–prey Body Size Relationships
D. Gravel T. Poisot C. Albouy L. Velez D. Mouillot
Ecological Interactions and the Netflix Problem
P. Desjardins-Proulx I. Laigle T. Poisot D. Gravel
Inferring Predator–prey Interactions in Food Webs
J.P.F. Pomeranz R.M. Thompson T. Poisot J.S. Harding
Optimal Transportation Theory for Species Interaction Networks
M. Stock T. Poisot B. De Baets
A Roadmap Towards Predicting Species Interaction Networks (Across Space and Time)
T. Strydom M.D. Catchen F. Banville D. Caron G. Dansereau P. Desjardins-Proulx N.R. Forero-Muñoz G. Higino B. Mercier A. Gonzalez D. Gravel L. Pollock T. Poisot
Graph Embedding and Transfer Learning Can Help Predict Potential Species Interaction Networks Despite Data Limitations
T. Strydom S. Bouskila F. Banville C. Barros D. Caron M.J. Farrell M.J. Fortin B. Mercier L.J. Pollock R. Runghen G.V. Dalla Riva T. Poisot