2017

Network structure and local adaptation in coevolving bacteria-phage interactions
Gurney, Aldakak, Betts, Gougat-barbera, Poisot, Kaltz, and Hochberg
Hosts, parasites and their interactions respond to different climatic variables
Poisot, Gueveneux-julien, Fortin, Gravel, and Legendre
Wind drives microbial eukaryote communities in a temperate closed lagoon
Péquin, Mohit, Poisot, Tremblay, and Lovejoy
Analyzing ecological networks of species interactions
Delmas, Besson, Brice, Burkle, Dalla riva, Fortin, Gravel, Guimaraes, Hembry, Newman, Olesen, Pires, Yeakel, and Poisot
Linear filtering reveals false negatives in species interaction data
Stock, Poisot, Waegeman, and Baets
Simulations of biomass dynamics in community food webs
Delmas, Brose, Gravel, Stouffer, and Poisot
Data-based, synthesis-driven: setting the agenda for computational ecology
Poisot, Labrie, Larson, and Rahlin
Sustainable computational science: the ReScience initiative
Rougier, Hinsen, Alexandre, Arildsen, Barba, Benureau, Brown, Buyl, Caglayan, Davison, Delsuc, Detorakis, Diem, Drix, Enel, Girard, Guest, Hall, Henriques, Hinaut, Jaron, Khamassi, Klein, Manninen, Marchesi, Mcglinn, Metzner, Petchey, Plesser, Poisot, Ram, Ram, Roesch, Rossant, Rostami, Shifman, Stachelek, Stimberg, Stollmeier, Vaggi, Viejo, Vitay, Vostinar, Yurchak, and Zito
Ecological interactions and the Netflix problem
Desjardins-proulx, Laigle, Poisot, and Gravel
paco: implementing Procrustean Approach to Cophylogeny in R
Hutchinson, Cagua, Balbuena, Stouffer, and Poisot
Interactions retain the co-phylogenetic matching that communities lost
Poisot, and Stouffer
Using Peer Review to Support Development of Community Resources for Research Data Management
Soyka, Budden, Hutchison, Bloom, Duckles, Hodge, Mayernik, Poisot, Rauch, Steinhart, Wasser, Whitmire, and Wright
Revealing biases in the sampling of ecological interaction networks
Aguiar, Newman, Pires, Yeakel, Hembry, Burkle, Gravel, Guimaraes jr, O'donnell, Poisot, and Fortin
Making Scientific Content More Accessibled Article
Goring, Whitney, Bruna, Jacob, and Poisot
Scientific Theories and Artificial Intelligence
Desjardins-proulx, Poisot, and Gravel

2016

BiMAT: a MATLAB package to facilitate the analysis and visualization of bipartite networks
Flores, Poisot, Valverde, and Weitz
Synthetic datasets and community tools for the rapid testing of ecological hypotheses
Poisot, Gravel, Leroux, Wood, Fortin, Baiser, Cirtwill, Araújo, and Stouffer
How ecological networks evolve
Poisot, and Stouffer
Describe, understand and predict: why do we need networks in ecology?
Poisot, Stouffer, and Kéfi
Bringing Elton and Grinnell together: a quantitative framework to represent the biogeography of ecological interaction networks
Gravel, Baiser, Dune, Kopelke, Martinez, Nyman, Poisot, Stouffer, Tylianakis, Wood, and Roslin
The structure of probabilistic networks
Poisot, Cirtwill, Cazelles, Gravel, Fortin, and Stouffer
Ten Simple Rules for Digital Data Storage
Hart, Barmby, Lebauer, Michonneau, Mount, Mulrooney, Poisot, Woo, Zimmerman, and Hollister
mangal - making ecological network analysis simple
Poisot, Baiser, Dunne, Kéfi, Massol, Mouquet, Romanuk, Stouffer, Wood, and Gravel

2015

Connecting people and ideas from around the world: global innovation platforms for next-generation ecology and beyond
Jørgensen, Barraquand, Bonhomme, Curran, Cieraad, Ezard, Gherardi, Hayes, Poisot, Salguero-gómez, and
The spread of a novel behavior in wild chimpanzees: New insights into the ape cultural mind
Gruber, Poisot, Zuberbühler, Hoppitt, and Hobaiter
A continuum of specialists and generalists in empirical communities
Poisot, Kéfi, Morand, Stanko, Marquet, and Hochberg
Best publishing practices to improve user confidence in scientific software
Poisot
When is co-phylogeny evidence of coevolution?
Poisot
Bacteriophage richness reduces bacterial niche overlap in experimental microcosms
Matias, Gravel, Combe, Poisot, Barbera, Lounnas, Bouvier, and Mouquet
Temperature and trophic structure are driving microbial productivity along a biogeographical gradient
Gray, Poisot, Harvey, Mouquet, Miller, and Gravel
Evolutionary Ecology of Specialisation
Vamosi, and Poisot
Beyond species: why ecological interaction networks vary through space and time
Poisot, Stouffer, and Gravel
The next generation of action ecology: novel approaches towards global ecological research
White, Sutton, Salguero-gómez, Bray, Campbell, Cieraad, Geekiyanage, Gherardi, Hughes, Jørgensen, Poisot, Desoto, and Zimmerman

2014

Using neutral theory to reveal the contribution of meta-community processes to assembly in complex landscapes
Gravel, Poisot, and Desjardins-proulx
Lack of quantitative training among early-career ecologists: a survey of the problem and potential solutions
Barraquand, Ezard, Jørgensen, Zimmerman, Chamberlain, Salguero-gómez, Curran, and Poisot
Social network analysis shows direct evidence for social transmission of tool use in wild chimpanzees
Hobaiter, Poisot, Zuberbühler, Hoppitt, and Gruber
Ongoing worldwide homogenization of human pathogens
Poisot, Nunn, and Morand
When is an ecological network complex? Connectance drives degree distribution and emerging network properties
Poisot, and Gravel
Dispersal and spatial heterogeneity allow coexistence between enemies and protective mutualists
Poisot, Bever, Thrall, and Hochberg

2013

The case for open preprints in biology
Desjardins-proulx, White, Adamson, Ram, Poisot, and Gravel
High-throughput sequencing: a roadmap toward community ecology
Poisot, Péquin, and Gravel
An a posteriori measure of network modularity
Poisot
Facultative and obligate parasite communities exhibit different network properties
Poisot, Stanko, Miklisová, and Morand
The structure of natural microbial enemy-victim networks
Poisot, Lounnas, and Hochberg
Inferring food web structure from predator-prey body size relationships
Gravel, Poisot, Albouy, Velez, and Mouillot
Moving toward a sustainable ecological science: don't let data go to waste!
Poisot, Mounce, and Gravel
Trophic complementarity drives the biodiversity-ecosystem functioning relationship in food webs
Poisot, Mouquet, and Gravel
Phage–bacteria infection networks
Weitz, Poisot, Meyer, Flores, Valverde, Sullivan, and Hochberg

2012

A simple model to study phylogeographies and speciation patterns in space
Desjardins-proulx, Rosindell, Poisot, and Gravel
Terminal investment induced by a bacteriophage in a rhizosphere bacterium
Poisot, Bell, Martinez, Gougat-barbera, and Hochberg
A comparative study of ecological specialization estimators
Poisot, Canard, Mouquet, and Hochberg
The dissimilarity of species interaction networks
Poisot, Canard, Mouillot, Mouquet, and Gravel

2011

A global network of next generation ecologists
Jorgensen, Bonhomme, Ezard, Hayes, Poisot, Salguero-gomez, Vizzini, and Zimmerman
Trophic network structure emerges through antagonistic coevolution in temporally varying environments
Poisot, Thrall, and Hochberg
The digitize package: extracting numerical data from scatterplots
Poisot
A conceptual framework for the evolution of ecological specialisation
Poisot, Bever, Nemri, Thrall, and Hochberg
Morphological and molecular evolution are not linked in Lamellodiscus (Plathyhelminthes, Monogenea)
Poisot, Verneau, and Desdevises

2010

Resource availability affects the structure of a natural bacteria--bacteriophage community
Poisot, Lepennetier, Martinez, Ramsayer, and Hochberg
Putative effects of recreational fishing of Paracentrotus lividus on populations of sea urchins in Mediterranean shallow water
Tessier, Poisot, Romans, and Desdevises
Putative speciation events in Lamellodiscus (Monogenea: Diplectanidae) assessed by a morphometric approach
Poisot, and Desdevises

2009

Interactions between immunocompetence, somatic condition and parasitism in the chub Leuciscus cephalus in early spring
Poisot, Simková, Hyřsl, and Morand