Papers

A foreword

This page is a list of our publications. The name of the journal has been omitted. If you want to get a sense of whether our research is sound, read it. Some of the entries on this page are un-reviewed preprints; if it appears here, we stand behind it.

Remember that when publishers turn the labor of researchers into profit, or re-direct public research funding to their shareholders through mandatory open access, they bring great value to humankind. If you are tempted to use a website like sci-hub to get access to our research for free (instead of paying a publisher for it), ask yourself: what would Aaron Swartz do?

List of publications

120
Save Lives in the Next Pandemic: Ensure Vaccine Equity Now
2024 — 10.1038/d41586-024-00545-3
Carlson, C. Becker, D. Happi, C. O’Donoghue, Z. Oliveira, T. Oyola, S. O. Poisot, T. Seifert, S. Phelan, A.
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119
Ten Simple Rules to Build a Model Life Cycle
2024 — 10.32942/X2XG8V
Poisot, T. Becker, D. Brookson, C. Graeden, E. Ryan, S. Turon, G. Carlson, C.
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118
The Influence of Scale-Dependent Geodiversity on Species Distribution Models in a Biodiversity Hotspot
2024 — 10.1098/rsta.2023.0057
Gerstner, B. E. Blair, M. E. Bills, P. Cruz-Rodriguez, C. A. Zarnetske, P. L.
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117
Postdoctoral Scientists Are Mentors, and It Is Time to Recognize Their Work
2023 — 10.1371/journal.pbio.3002349
Higino, G. Barros, C. Bledsoe, E. Roche, D. G. Binning, S. A. Poisot, T.
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116
Gradient Boosted Trees Can Deliver More Than Accurate Ecological Predictions
2023 — 10.24072/pci.ecology.100532
Poisot, T.
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115
Graph Embedding and Transfer Learning Can Help Predict Potential Species Interaction Networks Despite Data Limitations
2023 — 10.1111/2041-210X.14228
Strydom, T. Bouskila, S. Banville, F. Barros, C. Caron, D. Farrell, M. J. Fortin, M.J. Mercier, B. Pollock, L. J. Runghen, R. Dalla Riva, G. V. Poisot, T.
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114
SpatialBoundaries.jl: Edge Detection Using Spatial Wombling
2023 — 10.1111/ecog.06609
Strydom, T. Poisot, T.
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113
What Constrains Food Webs? a Maximum Entropy Framework for Predicting Their Structure With Minimal Biases
2023 — 10.1371/journal.pcbi.1011458
Banville, F. Gravel, D. Poisot, T.
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112
Spatially Explicit Predictions of Food Web Structure From Regional Level Data
2023
Dansereau, G. Barros, C. Poisot, T.
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111
The Future of Ecological Research Will Not Be (Fully) Automated
2023 — 10.22541/au.169384322.27179185/v1
Poisot, T. Riva, G. D. Desjardins-Proulx, P. Luccioni, A. S.
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110
A Global Biodiversity Observing System to Unite Monitoring and Guide Action
2023 — 10.1038/s41559-023-02171-0
Gonzalez, A. Vihervaara, P. Balvanera, P. Bates, A. E. Bayraktarov, E. Bellingham, P. J. Bruder, A. Campbell, J. Catchen, M. D. Cavender-Bares, J. Chase, J. Coops, N. Costello, M. J. Dornelas, M. Dubois, G. Duffy, E. J. Eggermont, H. Fernandez, N. Ferrier, S. Geller, G. N. Gill, M. Gravel, D. Guerra, C. A. Guralnick, R. Harfoot, M. Hirsch, T. Hoban, S. Hughes, A. C. Hunter, M. E. Isbell, F. Jetz, W. Juergens, N. Kissling, W. D. Krug, C. B. Le Bras, Y. Leung, B. Londoño-Murcia, M. C. Lord, J.M. Loreau, M. Luers, A. Ma, K. MacDonald, A. J. McGeoch, M. Millette, K. L. Molnar, Z. Mori, A. S. Muller-Karger, F. E. Muraoka, H. Navarro, L. Newbold, T. Niamir, A. Obura, D. O’Connor, M. Paganini, M. Pereira, H. Poisot, T. Pollock, L. J. Purvis, A. Radulovici, A. Rocchini, D. Schaepman, M. Schaepman-Strub, G. Schmeller, D. S. Schmiedel, U. Schneider, F. D. Shakya, M. M. Skidmore, A. Skowno, A. L. Takeuchi, Y. Tuanmu, M.N. Turak, E. Turner, W. Urban, M. C. Urbina-Cardona, N. Valbuena, R. Van Havre, B. Wright, E.
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109
Network Embedding Unveils the Hidden Interactions in the Mammalian Virome
2023 — 10.1016/j.patter.2023.100738
Poisot, T. Ouellet, M.A. Mollentze, N. Farrell, M. J. Becker, D. J. Brierley, L. Albery, G. F. Gibb, R. J. Seifert, S. N. Carlson, C. J.
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108
Plant Resistance to Pathogens: Just You Wait?
2023 — 10.24072/pci.evolbiol.100628
Poisot, T.
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107
Shortcomings of Reusing Species Interaction Networks Created by Different Sets of Researchers
2023 — 10.1371/journal.pbio.3002068
Brimacombe, C. Bodner, K. Michalska-Smith, M. Poisot, T. Fortin, M.J.
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106
Species Distribution Models: The Delicate Balance Between Signal and Noise
2023 — 10.24072/pci.ecology.100523
Poisot, T.
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105
A Social-Ecological Geography of Southern Canadian Lakes
2023 — 10.1101/2023.03.09.531893
Dupont, A. Botrel, M. St-Gelais, N. F. Poisot, T. Maranger, R.
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104
The Coevolutionary Mosaic of Bat Betacoronavirus Emergence Risk
2023 — 10.1093/ve/vead079
Forero-Muñoz, N. R. Muylaert, R. L. Seifert, S. N. Albery, G. F. Becker, D. J. Carlson, C. J. Poisot, T.
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103
Optimising Predictive Models to Prioritise Viral Discovery in Zoonotic Reservoirs
2022 — 10.1016/S2666-5247(21)00245-7
Becker, D. J. Albery, G. F. Sjodin, A. R. Poisot, T. Bergner, L. M. Chen, B. Cohen, L. E. Dallas, T. A. Eskew, E. A. Fagre, A. C. Farrell, M. J. Guth, S. Han, B. A. Simmons, N. B. Stock, M. Teeling, E. C. Carlson, C. J.
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102
Guidelines for the Validation of Machine Learning Predictions of Species Interactions
2022 — 10.32942/osf.io/aty7n
Poisot, T.
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101
Dissimilarity of Species Interaction Networks: Quantifying the Effect of Turnover and Rewiring
2022 — 10.24072/pcjournal.105
Poisot, T.
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100
Ten Simple Rules for Teaching Yourself R
2022 — 10.1371/journal.pcbi.1010372
Lawlor, J. Banville, F. Forero-Muñoz, N.R. Hébert, K. Martínez-Lanfranco, J. A. Rogy, P. MacDonald, A. A. M.
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99
Evaluating Ecological Uniqueness Over Broad Spatial Extents Using Species Distribution Modelling
2022 — 10.1111/oik.09063
Dansereau, G. Legendre, P. Poisot, T.
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98
The Global Virome in One Network (VIRION): An Atlas of Vertebrate-Virus Associations
2022 — 10.1128/mbio.02985-21
Carlson, C. J. Gibb, R. J. Albery, G. F. Brierley, L. Connor, R. P. Dallas, T. A. Eskew, E. A. Fagre, A. C. Farrell, M. J. Frank, H. K. Muylaert, R. L. Poisot, T. Rasmussen, A. L. Ryan, S. J. Seifert, S. N.
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97
Food Web Reconstruction Through Phylogenetic Transfer of Low‐rank Network Representation
2022 — 10.1111/2041-210X.13835
Strydom, T. Bouskila, S. Banville, F. Barros, C. Caron, D. Farrell, M. J. Fortin, M. Hemming, V. Mercier, B. Pollock, L. J. Runghen, R. Dalla Riva, G. V. Poisot, T.
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96
Increasing the Uptake of Ecological Model Results in Policy Decisions to Improve Biodiversity Outcomes
2022 — 10.1016/j.envsoft.2022.105318
Weiskopf, S. R. Harmáčková, Z. V. Johnson, C. G. Londoño-Murcia, M. C. Miller, B. W. Myers, B. J. E. Pereira, L. Arce-Plata, M. I. Blanchard, J. L. Ferrier, S. Fulton, E. A. Harfoot, M. Isbell, F. Johnson, J. A. Mori, A. S. Weng, E. Rosa, I. M. D.
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95
[Re] the Evolution of Virulence in Pathogens With Vertical and Horizontal Transmission
2021 — 10.5281/ZENODO.5722853
Dhane, F. Soeharjono, S. Stern, K. MacDonald, A. Poisot, T.
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94
A Roadmap Towards Predicting Species Interaction Networks (Across Space and Time)
2021 — 10.1098/rstb.2021.0063
Strydom, T. Catchen, M. D. Banville, F. Caron, D. Dansereau, G. Desjardins-Proulx, P. Forero-Muñoz, N. R. Higino, G. Mercier, B. Gonzalez, A. Gravel, D. Pollock, L. Poisot, T.
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93
SimpleSDMLayers.jl and GBIF.jl: A Framework for Species Distribution Modeling in Julia
2021 — 10.21105/joss.02872
Dansereau, G. Poisot, T.
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92
Environment–host–microbial Interactions Shape the Sarracenia Purpurea Microbiome at the Continental Scale
2021 — https://doi.org/10.1002/ecy.3308
Freedman, Z. B. McGrew, A. Baiser, B. Besson, M. Gravel, D. Poisot, T. Record, S. Trotta, L. B. Gotelli, N. J.
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91
Sampling and Asymptotic Network Properties of Spatial Multi-Trophic Networks
2021 — 10.1111/oik.08650
McLeod, A. Leroux, S. J. Gravel, D. Chu, C. Cirtwill, A. R. Fortin, M.J. Galiana, N. Poisot, T. Wood, S. A.
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90
SVD Entropy Reveals the High Complexity of Ecological Networks
2021 — 10.3389/fevo.2021.623141
Strydom, T. Dalla Riva, G. V. Poisot, T.
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89
Data Proliferation, Reconciliation, and Synthesis in Viral Ecology
2021 — 10.1093/biosci/biab080
Gibb, R. Albery, G. F. Becker, D. J. Brierley, L. Connor, R. Dallas, T. A. Eskew, E. A. Farrell, M. J. Rasmussen, A. L. Ryan, S. J. Sweeny, A. Carlson, C. J. Poisot, T.
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88
Computers Can Help Us Find Raccoons and Other Living Creatures
2021 — 10.3389/frym.2021.595275
Higino, G. T. Forero-Muñoz, N. R. Banville, F. Dansereau, G. Poisot, T.
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87
Mangal.jl and EcologicalNetworks.jl: Two Complementary Packages for Analyzing Ecological Networks in Julia
2021 — 10.21105/joss.02721
Banville, F. Vissault, S. Poisot, T.
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86
Imputing the Mammalian Virome With Linear Filtering and Singular Value Decomposition
2021
Poisot, T. Ouellet, M.A. Mollentze, N. Farrell, M. J. Becker, D. J. Albery, G. F. Gibb, R. J. Seifert, S. N. Carlson, C. J.
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85
Global Knowledge Gaps in Species Interaction Networks Data
2021 — 10.1111/jbi.14127
Poisot, T. Bergeron, G. Cazelles, K. Dallas, T. Gravel, D. MacDonald, A. Mercier, B. Violet, C. Vissault, S.
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84
Beta and Phylogenetic Diversities Tell Complementary Stories About Ecological Networks Biogeography
2021 — 10.32942/osf.io/zsnj4
Higino, G. T. Poisot, T.
Google Scholar
83
Optimal Transportation Theory for Species Interaction Networks
2021 — 10.1002/ece3.7254
Stock, M. Poisot, T. De Baets, B.
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82
The Science of the Host–virus Network
2021 — 10.1038/s41564-021-00999-5
Albery, G. F. Becker, D. J. Brierley, L. Brook, C. E. Christofferson, R. C. Cohen, L. E. Dallas, T. A. Eskew, E. A. Fagre, A. Farrell, M. J. Glennon, E. Guth, S. Joseph, M. B. Mollentze, N. Neely, B. A. Poisot, T. Rasmussen, A. L. Ryan, S. J. Seifert, S. Sjodin, A. R. Sorrell, E. M. Carlson, C. J.
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81
Omnidirectional and Omnifunctional Connectivity Analyses With a Diverse Species Pool
2020 — 10.1101/2020.02.03.932095
Lecours-Tessier, D. Maranger, R. Poisot, T.
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80
Testing Predictability of Disease Outbreaks With a Simple Model of Pathogen Biogeography
2020 — 10.1098/rsos.190883
Dallas, T. A. Carlson, C. J. Poisot, T.
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79
Novel Application of Convolutional Neural Networks for the Meta-Modeling of Large-Scale Spatial Data
2020
Stern, K. Poisot, T.
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78
[Re] Chaos in a Three-Species Food Chain
2020 — 10.5281/ZENODO.4022518
Dansereau, G. Banville, F. Basque, E. MacDonald, A. Poisot, T.
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77
Revisiting the Links-Species Scaling Relationship in Food Webs
2020 — 10.1016/j.patter.2020.100079
MacDonald, A. A. M. Banville, F. Poisot, T.
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76
Food Web Structure Alters Ecological Communities Top-Heaviness With Little Effect on the Biodiversity-Functioning Relationship.
2020 — 10.1101/2020.06.10.144949
Delmas, E. Stouffer, D. B. Poisot, T.
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75
Ecogeographical Rules and the Macroecology of Food Webs
2019 — 10.1111/geb.12925
Baiser, B. Gravel, D. Cirtwill, A. R. Dunne, J. A. Fahimipour, A. K. Gilarranz, L. J. Grochow, J. A. Li, D. Martinez, N. D. McGrew, A. Poisot, T. Romanuk, T. N. Stouffer, D. B. Trotta, L. B. Valdovinos, F. S. Williams, R. J. Wood, S. A. Yeakel, J. D.
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74
Artificial Intelligence for Ecological and Evolutionary Synthesis
2019 — 10.3389/fevo.2019.00402
Desjardins-Proulx, P. Poisot, T. Gravel, D.
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73
Key Questions for Next-Generation Biomonitoring
2019 — 10.3389/fenvs.2019.00197
Makiola, A. Compson, Z. G. Baird, D. Barnes, M. A. Boerlijst, S. P. Bouchez, A. Brennan, G. Bush, A. Canard, E. Cordier, T. Creer, S. Curry, A. David, P. Dumbrell, A. Gravel, D. Hajibabaei, M. Hayden, B. Hoorn, B. Jarne, P. Jones, I. Karimi, B. Keck, F. Kelly, M. Knot, I. Krol, L. Massol, F. Monk, W. Murphy, K. Pawlowski, J. Poisot, T. Porter, T. Randall, K. Ransome, E. Ravigné, V. Raybould, A. Robin, S. Schrama, M. Schatz, B. Tamaddoni-Nezhad, A. Trimbos, K. B. Vacher, C. Vasselon, V. Wood, S. A. Woodward, G. Bohan, D. A.
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72
Functional Diversity: An Epistemic Roadmap
2019 — 10.1093/biosci/biz089
Malaterre, C. Dussault, A. C. Rousseau-Mermans, S. Barker, G. Beisner, B. E. Bouchard, F. Desjardins, E. Handa, I. T. Kembel, S. W. Lajoie, G. Maris, V. Munson, A. D. Odenbaugh, J. Poisot, T. Shapiro, B. J. Suttle, C. A.
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71
EcologicalNetworks.jl - Analysing Ecological Networks
2019 — 10.5281/zenodo.1438428
Poisot, T. Belisle, Z. Hoebeke, L. Stock, M. Szefer, P.
Google Scholar
70
Revealing Biases in the Sampling of Ecological Interaction Networks
2019 — 10.7717/peerj.7566
Aguiar, M. A. Newman, E. A. Pires, M. M. Yeakel, J. D. Boettiger, C. Burkle, L. A. Gravel, D. Guimarães, P. R. O’Donnell, J. L. Poisot, T. Fortin, M.J. Hembry, D. H.
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69
The Marine Fish Food Web Is Globally Connected
2019 — 10.1038/s41559-019-0950-y
Albouy, C. Archambault, P. Appeltans, W. Araújo, M. B. Beauchesne, D. Cazelles, K. Cirtwill, A. R. Fortin, M.J. Galiana, N. Leroux, S. J. Pellissier, L. Poisot, T. Stouffer, D. B. Wood, S. A. Gravel, D.
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68
Data-Based, Synthesis-Driven: Setting the Agenda for Computational Ecology
2019 — 10.24908/iee.2019.12.2.e
Poisot, T. LaBrie, R. Larson, E. Rahlin, A. Simmons, B. I.
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67
Ecological Data Should Not Be So Hard to Find and Reuse
2019 — 10.1016/j.tree.2019.04.005
Poisot, T. Bruneau, A. Gonzalez, A. Gravel, D. Peres-Neto, P.
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66
[Re] Insect Natural Enemies as Regulating Factors
2019 — 10.5281/zenodo.2598793
Caron, D. Lessard, V. Wu, Q. Poisot, T.
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65
Interactions Retain the Co-Phylogenetic Matching That Communities Lost
2018 — 10.1111/oik.03788
Poisot, T. Stouffer, D. B.
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64
Complex Ecological Networks
2018 — 10.1016/B978-0-12-409548-9.10564-0
Besson, M. Delmas, E. Poisot, T. Gravel, D.
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63
Homogenization of Species Composition and Species Association Networks Are Decoupled
2018 — 10.1111/geb.12825
Li, D. Poisot, T. Waller, D. M. Baiser, B.
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62
Inferring Predator-Prey Interactions in Food Webs
2018 — 10.1111/2041-210X.13125
Pomeranz, J. P. Thompson, R. M. Poisot, T. Harding, J. S.
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61
Bringing Elton and Grinnell Together: A Quantitative Framework to Represent the Biogeography of Ecological Interaction Networks
2018 — 10.1111/ecog.04006
Gravel, D. Baiser, B. Dunne, J. A. Kopelke, J.P. Martinez, N. D. Nyman, T. Poisot, T. Stouffer, D. B. Tylianakis, J. M. Wood, S. A. Roslin, T.
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60
[Re] on the Coexistence of Specialists and Generalists
2018 — 10.5281/zenodo.1402676
Poisot, T.
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59
Identifying a Common Backbone of Interactions Underlying Food Webs From Different Ecosystems
2018 — 10.1038/s41467-018-05056-0
Mora, B. B. Gravel, D. Gilarranz, L. J. Poisot, T. Stouffer, D. B.
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58
Analysing Ecological Networks of Species Interactions
2018 — 10.1111/brv.12433
Delmas, E. Besson, M. Brice, M.H. Burkle, L. A. Dalla Riva, G. V. Fortin, M.J. Gravel, D. Guimarães, P. R. Hembry, D. H. Newman, E. A. Olesen, J. M. Pires, M. M. Yeakel, J. D. Poisot, T.
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57
Management, Archiving, and Sharing for Biologists and the Role of Research Institutions in the Technology-Oriented Age
2018 — 10.1093/biosci/biy038
Renaut, S. Budden, A. E. Gravel, D. Poisot, T. Peres-Neto, P.
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56
Network Structure and Local Adaptation in Coevolving Bacteria-Phage Interactions
2017 — 10.1111/mec.14008
Gurney, J. Aldakak, L. Betts, A. Gougat-Barbera, C. Poisot, T. Kaltz, O. Hochberg, M. E.
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55
Ecological Interactions and the Netflix Problem
2017 — 10.7717/peerj.3644
Desjardins-Proulx, P. Laigle, I. Poisot, T. Gravel, D.
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54
Making Scientific Content More Accessible
2017 — 10.22541/au.150844289.92609826
Goring, S. Whitney, K. S. Bruna, E. M. Jacob, A. L. Poisot, T.
Google Scholar
53
Wind Drives Microbial Eukaryote Communities in a Temperate Closed Lagoon
2017 — 10.3354/ame01814
Péquin, B. Mohit, V. Poisot, T. Tremblay, R. Lovejoy, C.
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52
Using Peer Review to Support Development of Community Resources for Research Data Management
2017 — 10.7191/jeslib.2017.1114
Soyka, H. Budden, A. Hutchison, V. Bloom, D. Duckles, J. Hodge, A. Mayernik, M. Poisot, T. Rauch, S. Steinhart, G. Wasser, L. Whitmire, A. Wright, S.
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51
Paco: Implementing Procrustean Approach to Cophylogeny in R
2017 — 10.1111/2041-210X.12736
Hutchinson, M. C. Cagua, E. F. Balbuena, J. A. Stouffer, D. B. Poisot, T.
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50
Hosts, Parasites and Their Interactions Respond to Different Climatic Variables
2017 — 10.1111/geb.12602
Poisot, T. Guéveneux-Julien, C. Fortin, M.J. Gravel, D. Legendre, P.
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49
Simulations of Biomass Dynamics in Community Food Webs
2017 — 10.1111/2041-210X.12713
Delmas, E. Brose, U. Gravel, D. Stouffer, D. B. Poisot, T.
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48
Linear Filtering Reveals False Negatives in Species Interaction Data
2017 — 10.1038/srep45908
Stock, M. Poisot, T. Waegeman, W. Baets, B. D.
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47
Compositional Turnover in Host and Parasite Communities Does Not Change Network Structure
2017 — 10.1111/ecog.03514
Dallas, T. Poisot, T.
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46
Sustainable Computational Science: The ReScience Initiative
2017 — 10.7717/peerj-cs.142
Rougier, N. P. Hinsen, K. Alexandre, F. Arildsen, T. Barba, L. A. Benureau, F. C. Y. Brown, C. T. Buyl, P. Caglayan, O. Davison, A. P. Delsuc, M.A. Detorakis, G. Diem, A. K. Drix, D. Enel, P. Girard, B. Guest, O. Hall, M. G. Henriques, R. N. Hinaut, X. Jaron, K. S. Khamassi, M. Klein, A. Manninen, T. Marchesi, P. McGlinn, D. Metzner, C. Petchey, O. Plesser, H. E. Poisot, T. Ram, K. Ram, Y. Roesch, E. Rossant, C. Rostami, V. Shifman, A. Stachelek, J. Stimberg, M. Stollmeier, F. Vaggi, F. Viejo, G. Vitay, J. Vostinar, A. E. Yurchak, R. Zito, T.
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45
BiMAT: A MATLAB Package to Facilitate the Analysis and Visualization of Bipartite Networks
2016 — 10.1111/2041-210X.12458
Flores, C. O. Poisot, T. Valverde, S. Weitz, J. S.
Google Scholar
44
How Ecological Networks Evolve
2016 — 10.1101/071993
Poisot, T. Stouffer, D.
Google Scholar
43
Ten Simple Rules for Digital Data Storage
2016 — 10.1371/journal.pcbi.1005097
Hart, E. M. Barmby, P. LeBauer, D. Michonneau, F. Mount, S. Mulrooney, P. Poisot, T. Woo, K. H. Zimmerman, N. B. Hollister, J. W.
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42
Mangal - Making Ecological Network Analysis Simple
2016 — 10.1111/ecog.00976
Poisot, T. Baiser, B. Dunne, J. A. Kéfi, S. Massol, F. Mouquet, N. Romanuk, T. N. Stouffer, D. B. Wood, S. A. Gravel, D.
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41
Synthetic Datasets and Community Tools for the Rapid Testing of Ecological Hypotheses
2016 — 10.1111/ecog.01941
Poisot, T. Gravel, D. Leroux, S. Wood, S. A. Fortin, M.J. Baiser, B. Cirtwill, A. R. Araújo, M. B. Stouffer, D. B.
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40
The Structure of Probabilistic Networks
2016 — 10.1111/2041-210X.12468
Poisot, T. Cirtwill, A. R. Cazelles, K. Gravel, D. Fortin, M.J. Stouffer, D. B.
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39
Describe, Understand and Predict: Why Do We Need Networks in Ecology?
2016 — 10.1111/1365-2435.12799
Poisot, T. Stouffer, D. B. Kéfi, S.
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38
Temperature and Trophic Structure Are Driving Microbial Productivity Along a Biogeographical Gradient
2015 — 10.1111/ecog.01748
Gray, S. M. Poisot, T. Harvey, E. Mouquet, N. Miller, T. E. Gravel, D.
Google Scholar
37
The Spread of a Novel Behavior in Wild Chimpanzees: New Insights Into the Ape Cultural Mind
2015 — 10.1080/19420889.2015.1017164
Gruber, T. Poisot, T. Zuberbühler, K. Hoppitt, W. Hobaiter, C.
Google Scholar
36
Connecting People and Ideas From Around the World: Global Innovation Platforms for Next-Generation Ecology and Beyond
2015 — 10.1890/ES14-00198.1
Jørgensen, P. S. Barraquand, F. Bonhomme, V. Curran, T. J. Cieraad, E. Ezard, T. G. Gherardi, L. A. Hayes, R. A. Poisot, T. Salguero-Gómez, R. , .
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Bacteriophage Richness Reduces Bacterial Niche Overlap in Experimental Microcosms
2015 — 10.7287/peerj.preprints.1100v1
Matias, M. G. Gravel, D. Combe, M. Poisot, T. Barbera, C. Lounnas, M. Bouvier, T. Mouquet, N.
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A Continuum of Specialists and Generalists in Empirical Communities
2015 — 10.1371/journal.pone.0114674
Poisot, T. Kéfi, S. Morand, S. Stanko, M. Marquet, P. A. Hochberg, M. E.
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Beyond Species: Why Ecological Interaction Networks Vary Through Space and Time
2015 — 10.1111/oik.01719
Poisot, T. Stouffer, D. B. Gravel, D.
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When Is Co-Phylogeny Evidence of Coevolution?
2015
Poisot, T.
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Evolutionary Ecology of Specialisation
2015
Vamosi, J. C. Poisot, T.
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The Next Generation of Action Ecology: Novel Approaches Towards Global Ecological Research
2015 — 10.1890/es14-00485.1
White, R. L. Sutton, A. E. Salguero-Gómez, R. Bray, T. C. Campbell, H. Cieraad, E. Geekiyanage, N. Gherardi, L. Hughes, A. C. Jørgensen, P. S. Poisot, T. DeSoto, L. Zimmerman, N.
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Best Publishing Practices to Improve User Confidence in Scientific Software
2015 — 10.4033/iee.2015.8.8.f
Poisot, T.
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When Is an Ecological Network Complex? Connectance Drives Degree Distribution and Emerging Network Properties
2014 — 10.7717/peerj.251
Poisot, T. Gravel, D.
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Lack of Quantitative Training Among Early-Career Ecologists: A Survey of the Problem and Potential Solutions
2014 — 10.7717/peerj.285
Barraquand, F. Ezard, T. H. G. Jørgensen, P. S. Zimmerman, N. Chamberlain, S. Salguero-Gómez, R. Curran, T. J. Poisot, T.
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Using Neutral Theory to Reveal the Contribution of Meta-Community Processes to Assembly in Complex Landscapes
2014 — 10.4081/jlimnol.2014.807
Gravel, D. Poisot, T. Desjardins-Proulx, P.
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Ongoing Worldwide Homogenization of Human Pathogens
2014 — 10.1101/009977
Poisot, T. Nunn, C. Morand, S.
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24
Dispersal and Spatial Heterogeneity Allow Coexistence Between Enemies and Protective Mutualists
2014 — 10.1002/ece3.1151
Poisot, T. Bever, J. D. Thrall, P. H. Hochberg, M. E.
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23
Social Network Analysis Shows Direct Evidence for Social Transmission of Tool Use in Wild Chimpanzees
2014 — 10.1371/journal.pbio.1001960
Hobaiter, C. Poisot, T. Zuberbühler, K. Hoppitt, W. Gruber, T.
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22
Inferring Food Web Structure From Predator-Prey Body Size Relationships
2013 — 10.1111/2041-210X.12103
Gravel, D. Poisot, T. Albouy, C. Velez, L. Mouillot, D.
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The Case for Open Preprints in Biology
2013 — 10.1371/journal.pbio.1001563
Desjardins-Proulx, P. White, E. P. Adamson, J. J. Ram, K. Poisot, T. Gravel, D.
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Moving Toward a Sustainable Ecological Science: Don't Let Data Go to Waste!
2013 — 10.4033/iee.2013.6b.14.f
Poisot, T. Mounce, R. Gravel, D.
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The Structure of Natural Microbial Enemy-Victim Networks
2013 — 10.1186/2192-1709-2-13
Poisot, T. Lounnas, M. Hochberg, M. E.
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Trophic Complementarity Drives the Biodiversity-Ecosystem Functioning Relationship in Food Webs
2013 — 10.1111/ele.12118
Poisot, T. Mouquet, N. Gravel, D.
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Phage–bacteria Infection Networks
2013 — 10.1016/j.tim.2012.11.003
Weitz, J. S. Poisot, T. Meyer, J. R. Flores, C. O. Valverde, S. Sullivan, M. B. Hochberg, M. E.
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Facultative and Obligate Parasite Communities Exhibit Different Network Properties
2013 — 10.1017/S0031182013000851
Poisot, T. Stanko, M. Miklisová, D. Morand, S.
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High-Throughput Sequencing: A Roadmap Toward Community Ecology
2013 — 10.1002/ece3.508
Poisot, T. Péquin, B. Gravel, D.
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An a Posteriori Measure of Network Modularity
2013 — 10.12688/f1000research.2-130.v3
Poisot, T.
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A Simple Model to Study Phylogeographies and Speciation Patterns in Space
2012
Desjardins-Proulx, P. Rosindell, J. L. Poisot, T. Gravel, D.
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A Comparative Study of Ecological Specialization Estimators
2012 — 10.1111/j.2041-210X.2011.00174.x
Poisot, T. Canard, E. Mouquet, N. Hochberg, M. E.
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The Dissimilarity of Species Interaction Networks
2012 — 10.1111/ele.12002
Poisot, T. Canard, E. Mouillot, D. Mouquet, N. Gravel, D.
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10
Terminal Investment Induced by a Bacteriophage in a Rhizosphere Bacterium
2012 — 10.12688/f1000research.1-21.v2
Poisot, T. Bell, T. Martinez, E. Gougat-Barbera, C. Hochberg, M. E.
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A Global Network of Next Generation Ecologists
2011
Jorgensen, P. S. Bonhomme, V. Ezard, T. H. Hayes, R. A. Poisot, T. Salguero-Gomez, R. Vizzini, S. Zimmerman, N.
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A Conceptual Framework for the Evolution of Ecological Specialisation
2011 — 10.1111/j.1461-0248.2011.01645.x
Poisot, T. Bever, J. D. Nemri, A. Thrall, P. H. Hochberg, M. E.
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The Digitize Package: Extracting Numerical Data From Scatterplots
2011
Poisot, T.
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Morphological and Molecular Evolution Are Not Linked in Lamellodiscus (Plathyhelminthes, Monogenea)
2011 — 10.1371/journal.pone.0026252
Poisot, T. Verneau, O. Desdevises, Y.
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5
Trophic Network Structure Emerges Through Antagonistic Coevolution in Temporally Varying Environments
2011 — 10.1098/rspb.2011.0826
Poisot, T. Thrall, P. H. Hochberg, M. E.
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4
Putative Speciation Events in Lamellodiscus (Monogenea: Diplectanidae) Assessed by a Morphometric Approach
2010 — 10.1111/j.1095-8312.2009.01381.x
Poisot, T. Desdevises, Y.
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3
Resource Availability Affects the Structure of a Natural Bacteria--Bacteriophage Community
2010 — 10.1098/rsbl.2010.0774
Poisot, T. Lepennetier, G. Martinez, E. Ramsayer, J. Hochberg, M. E.
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2
Putative Effects of Recreational Fishing of Paracentrotus Lividus on Populations of Sea Urchins in Mediterranean Shallow Water
2010
Tessier, A. Poisot, T. Romans, P. Desdevises, Y.
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1
Interactions Between Immunocompetence, Somatic Condition and Parasitism in the Chub Leuciscus Cephalus in Early Spring
2009 — 10.1111/j.1095-8649.2009.02400.x
Poisot, T. Simková, A. Hyřsl, P. Morand, S.
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